SNP Profiles of POUND 4 /A   View Data

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 1234567891011121314
_Input profile
CCAGGGCTTTACCCTTCCCCAAAGCCAG
1._GC-08-158-4-01
CCAGGGCTTTACCCTTCCCCAAAGCCAG
2._POUND_4_/A
CCAGGGCTTTACCCTTCCCCAAAGCCAG
3._GC-08-159-4-02
CCAGGGCTTTACCCTTCCCCAAAGCCAG
4._GC-08-159-4-02
CCAGGGCTTTACCCTTCCCCAAAGCCAG
5._GC-08-159-4-02
CCAGGGCTTTACCCTTCCCCAAAGCCAG
6._POUND_4_/A
CCAGGGCTTTACCCTTCCCCAAAGCCAG
7._POUND_4_/A
CCAGGGCTTTACCCTTCCCCAAAGCCAG
8._GC-08-159-4-02
CCAGGGCTTTACCC_CCCCAAAGCCAG
9._POUND_4_/A
CCAGGGCTTTACCC_CCCCAAAGCCAG
10._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
11._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
12._GC-08-158-4-01
CCAGCGTTCTACTTGTCCCCAAAGCCAA
13._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
14._GC-08-158-4-01
CCAGCGTTCTACTTGTCCCCAAAGCCAA
15._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
16._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
17._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
18._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
19._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
20._GC-08-158-4-01
CCAGCGTTCTACTTGTCCCCAAAGCCAA
21._GC-08-158-4-01
CCAGCGTTCTACTTGTCCCCAAAGCCAA
22._GC-08-158-4-01
CCAGCGTTCTACTTGTCCCCAAAGCCAA
23._GC-08-159-4-02
CCAGCGTTCTACTTGTCCCCAAAGCCAA
24._GC-08-159-4-02
CCAGCGTTCTACTTGTCCCCAAAGCCAA
25._GC-08-159-4-02
CCAGCGTTCTACTTGTCCCCAAAGCCAA
26._GC-08-159-4-02
CCAGCGTTCTACTTGTCCCCAAAGCCAA
27._GC-08-158-4-01
CCAGCGTTCTACTTGTCCCCAAAGCCAA
28._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
29._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
30._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
31._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
32._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
33._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
34._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
35._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
36._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
37._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
38._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
39._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
40._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
41._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
42._GC-04-043-3-07
CCAGCGTTCTACTTGTCCCCAAAGCCAA
43._POUND_4_/A
CCAGCGTTCTACTTGTCCCCAAAGCCAA
44._POUND_4_/A
CCAGGGTTCTCCTTGTCTCCATGGCCAA
45._GC-08-159-4-02
CCGGCGCTCT_TTGGTTCCATGGCCAA
46._POUND_4_/A
CCGGCGCTCT_TTGGTTCCATGGCCAA
 1516171819202122232425262728
_Input profile
CCAACGCTCCGGGGAGTTCGGGTTAAAA
1._GC-08-158-4-01
CCAACGCTCCGGGGAGTTCGGGTTAAAA
2._POUND_4_/A
CCAACGCTCCGGGGAGTTCGGGTTAAAA
3._GC-08-159-4-02
CCAACGCTCCGGGGAGTTCGGGTTAAAA
4._GC-08-159-4-02
CCAACGCTCCGGGGAGTTCGGGTTAAAA
5._GC-08-159-4-02
CCAACGCTCCGGGGAGTTCGGGTTAAAA
6._POUND_4_/A
CCAACGCTCCGGGGAGTTCGGGTTAAAA
7._POUND_4_/A
CCAACGCTCCGGGGAGTTCGGGTTAAAA
8._GC-08-159-4-02
CCAACGCTCCGGGGAGTT_GGTTAAAA
9._POUND_4_/A
CCAACGCTCCGGGGAGTT_GGTTAAAA
10._GC-04-043-3-07
CCATGGTTTTCGGGAACTGGGTCTCCAG
11._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCAG
12._GC-08-158-4-01
CCATGG_TTCGGGAACTGGGTCTCCGG
13._POUND_4_/A
CCATGG_TTCGGGAACTGGGTCTCCGG
14._GC-08-158-4-01
CCATGGTTTTCGGGAACTGGGTCTCCGG
15._GC-04-043-3-07
CCATGGTTTTCGGGAACTGGGTCTCCGG
16._GC-04-043-3-07
CCATGGTTTTCGGGAACTGGGTCTCCGG
17._GC-04-043-3-07
CCATGGTTTTCGGGAACTGGGTCTCCGG
18._GC-04-043-3-07
CCATGGTTTTCGGGAACTGGGTCTCCGG
19._GC-04-043-3-07
CCATGGTTTTCGGGAACTGGGTCTCCGG
20._GC-08-158-4-01
CCATGGTTTTCGGGAACTGGGTCTCCGG
21._GC-08-158-4-01
CCATGGTTTTCGGGAACTGGGTCTCCGG
22._GC-08-158-4-01
CCATGGTTTTCGGGAACTGGGTCTCCGG
23._GC-08-159-4-02
CCATGGTTTTCGGGAACTGGGTCTCCGG
24._GC-08-159-4-02
CCATGGTTTTCGGGAACTGGGTCTCCGG
25._GC-08-159-4-02
CCATGGTTTTCGGGAACTGGGTCTCCGG
26._GC-08-159-4-02
CCATGGTTTTCGGGAACTGGGTCTCCGG
27._GC-08-158-4-01
CCATGGTTTTCGGGAACTGGGTCTCCGG
28._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
29._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
30._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
31._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
32._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
33._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
34._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
35._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
36._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
37._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
38._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
39._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
40._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
41._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
42._GC-04-043-3-07
CCATGGTTTTCGGGAACTGGGTCTCCGG
43._POUND_4_/A
CCATGGTTTTCGGGAACTGGGTCTCCGG
44._POUND_4_/A
CCAAGGCTTTCGGTAACCCGGGCCACAA
45._GC-08-159-4-02
CTAACGTTTTCGGGGGTTGGGGCCACAG
46._POUND_4_/A
CTAACGTTTTCGGGGGTTGGGGCCACAG
 2930313233343536373839   
_Input profile
GGAACCAGCCAACCGGAAATGGX_XX_XX_X
1._GC-08-158-4-01
GGAACCAGCCAACCGGAAATGGX_XX_XX_X
2._POUND_4_/A
GGAACCAGCCAACCGGAAATGGX_XX_XX_X
3._GC-08-159-4-02
GGAACCAGCCAACCGGAAATGGX_XX_XX_X
4._GC-08-159-4-02
GGAACCAGCCAACCGGAAATGGX_XX_XX_X
5._GC-08-159-4-02
GGAACCAGCCAACCGGAAATGGX_XX_XX_X
6._POUND_4_/A
GGAACCAGCCAACCGGAAATGGX_XX_XX_X
7._POUND_4_/A
GGAACCAGCCAACCGGAAATGGX_XX_XX_X
8._GC-08-159-4-02
GGAACCAGCCAACCGGAAATGGX_XX_XX_X
9._POUND_4_/A
GGAACCAGCCAACCGGAAATGGX_XX_XX_X
10._GC-04-043-3-07
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
11._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
12._GC-08-158-4-01
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
13._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
14._GC-08-158-4-01
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
15._GC-04-043-3-07
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
16._GC-04-043-3-07
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
17._GC-04-043-3-07
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
18._GC-04-043-3-07
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
19._GC-04-043-3-07
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
20._GC-08-158-4-01
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
21._GC-08-158-4-01
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
22._GC-08-158-4-01
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
23._GC-08-159-4-02
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
24._GC-08-159-4-02
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
25._GC-08-159-4-02
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
26._GC-08-159-4-02
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
27._GC-08-158-4-01
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
28._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
29._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
30._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
31._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
32._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
33._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
34._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
35._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
36._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
37._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
38._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
39._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
40._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
41._POUND_4_/A
GGAACTAGCGACCCGGCCTTGGX_XX_XX_X
42._GC-04-043-3-07
GGAACTAGCGAC_GGCCTTGGX_XX_XX_X
43._POUND_4_/A
GGAACTAGCGAC_GGCCTTGGX_XX_XX_X
44._POUND_4_/A
AGAACTAACGACCTGGCCTTGGX_XX_XX_X
45._GC-08-159-4-02
AAATCCAGCCCCTTGGAAATCGX_XX_XX_X
46._POUND_4_/A
AAATCCAGCCCCTTGGAAATCGX_XX_XX_X

Input profile: POUND_4_/A

 
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Mars Center for Cocoa Science, Brazil
Location: 8401 8
 Dapeng Zhang, 2016

1._POUND_4_/A GC-08-158-4-01

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

2._POUND_4_/A

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 13
 Dapeng Zhang, 2016

3._POUND_4_/A GC-08-159-4-02

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

4._POUND_4_/A GC-08-159-4-02

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

5._POUND_4_/A GC-08-159-4-02

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

6._POUND_4_/A

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 10
 Dapeng Zhang, 2016

7._POUND_4_/A

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 8
 Dapeng Zhang, 2016

8._POUND_4_/A GC-08-159-4-02

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

9._POUND_4_/A

identical
37 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 5
 Dapeng Zhang, 2016

10._POUND_4_/A GC-04-043-3-07

65.4 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

11._POUND_4_/A

65.4 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 6
 Dapeng Zhang, 2016

12._POUND_4_/A GC-08-158-4-01

64.5 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

13._POUND_4_/A

64.5 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 9
 Dapeng Zhang, 2016

14._POUND_4_/A GC-08-158-4-01

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

15._POUND_4_/A GC-04-043-3-07

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

16._POUND_4_/A GC-04-043-3-07

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP1
 Mars, 2018

17._POUND_4_/A GC-04-043-3-07

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP2
 Mars, 2018

18._POUND_4_/A GC-04-043-3-07

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP3
 Mars, 2018

19._POUND_4_/A GC-04-043-3-07

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7 > FP4
 Mars, 2018

20._POUND_4_/A GC-08-158-4-01

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

21._POUND_4_/A GC-08-158-4-01

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

22._POUND_4_/A GC-08-158-4-01

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

23._POUND_4_/A GC-08-159-4-02

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

24._POUND_4_/A GC-08-159-4-02

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

25._POUND_4_/A GC-08-159-4-02

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

26._POUND_4_/A GC-08-159-4-02

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 12
Notes: 12
 Mars, 2018

27._POUND_4_/A GC-08-158-4-01

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

28._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

29._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 2 > FP
 Dapeng Zhang, 2016

30._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 3 > FP
 Dapeng Zhang, 2016

31._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 4 > FP
 Dapeng Zhang, 2016

32._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 7 > FP
 Dapeng Zhang, 2016

33._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 5
 Dapeng Zhang, 2016

34._POUND_4_/A

64.1 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8401 7
 Dapeng Zhang, 2016

35._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 7
 Dapeng Zhang, 2016

36._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 11
 Dapeng Zhang, 2016

37._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8401 12
 Dapeng Zhang, 2016

38._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 6
 Dapeng Zhang, 2016

39._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 7
 Dapeng Zhang, 2016

40._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 9
 Dapeng Zhang, 2016

41._POUND_4_/A

64.1 %
39 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 12
 Dapeng Zhang, 2016

42._POUND_4_/A GC-04-043-3-07

63.2 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

43._POUND_4_/A

63.2 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 4307 5
 Dapeng Zhang, 2016

44._POUND_4_/A

61.5 %
39 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F411 T15
 Dapeng Zhang, 2016

45._POUND_4_/A GC-08-159-4-02

59.2 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

46._POUND_4_/A

59.2 %
38 shared markers

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Mars Center for Cocoa Science, Brazil
Location: 8402 4
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP577 25TcSNP560
26TcSNP534 27TcSNP529 28TcSNP469 29TcSNP429 30TcSNP372
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25